Function reference
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bees - Bee data
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compare_conditions() - Calculates PCCs and c-values based on pairwise comparison of conditions.
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compare_groups() - Calculate the c-value of the difference in PCCs produced by two groups
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compare_hypotheses() - Calculate the c-value of the difference in PCCs produced by two hypotheses
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correct_pairs() - Return the number of pairs of observations matched by the hypothesis
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cval_plot() - Plot individual chance values
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group_cvals() - Return the group chance values of the specified model
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group_pccs() - Return the group PCCs of the specified model
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group_results() - Group-level PCC and chance values.
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hypothesis() - Create a hypothesis object
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incorrect_pairs() - Return the number of pairs of observations not matched by the hypothesis
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individual_cvals() - Return the individual chance values of the specified model
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individual_pccs() - Return the individual PCCs of the specified model
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individual_results() - Individual-level PCC and chance values.
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opa() - Fit an ordinal pattern analysis model
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pcc_plot() - Plot individual PCCs.
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pituitary - Childhood growth data
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plot(<opaGroupComparison>) - Plot group comparison PCC replicates.
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plot(<opaHypothesisComparison>) - Plot hypothesis comparison PCC replicates.
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plot(<opafit>) - Plots individual-level PCCs and chance-values.
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plot(<opahypothesis>) - Plot a hypothesis.
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plot(<oparandpccs>) - Plot PCC replicates.
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print(<opaGroupComparison>) - Prints a summary of results from hypothesis comparison.
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print(<opaHypothesisComparison>) - Prints a summary of results from hypothesis comparison.
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print(<opafit>) - Displays the call used to fit an ordinal pattern analysis model.
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print(<opahypothesis>) - Print details of a hypothesis
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print(<pairwiseopafit>) - Displays the results of a pairwise ordinal pattern analysis.
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random_pccs() - Return the random order generated PCCs used to calculate the group chance value
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summary(<opaGroupComparison>) - Prints a summary of results from hypothesis comparison.
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summary(<opaHypothesisComparison>) - Prints a summary of results from hypothesis comparison.
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summary(<opafit>) - Prints a summary of results from a fitted ordinal pattern analysis model.